Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative microcin b17 uptake protein | SAMEA3472110_00743 | Not Available | Negative | 799296 - 800516 | 46443.9 |
| uncharacterised protein | SAMEA3472110_00744 | Not Available | Positive | 800721 - 800822 | 3919.98 |
| penicillin-binding protein | SAMEA3472110_00745 | Not Available | Positive | 800868 - 802025 | 41909.6 |
| dna-binding transcriptional regulator | SAMEA3472110_00746 | Not Available | Negative | 802026 - 802649 | 23930.0 |
| putative flagellin-like structural protein | SAMEA3472110_00747 | Not Available | Negative | 802735 - 805644 | 104089.0 |
| delta-aminolevulinic acid dehydratase | SAMEA3472110_00748 | Not Available | Positive | 806170 - 807144 | 35635.8 |
| alpha-ketoglutarate-dependent taurine dioxygenase | SAMEA3472110_00749 | Not Available | Negative | 807184 - 808035 | 32396.3 |
| taurine abc transporter permease | SAMEA3472110_00750 | Not Available | Negative | 808032 - 808859 | 29571.5 |
| taurine abc transporter atp-binding protein | SAMEA3472110_00751 | Not Available | Negative | 808856 - 809623 | 28261.5 |
| taurine transporter substrate binding subunit | SAMEA3472110_00752 | Not Available | Negative | 809636 - 810598 | 34253.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





