Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate regulon two-component system, response regulator | SAMEA3472110_00723 | Not Available | Negative | 779430 - 780119 | 26435.0 |
| exonuclease sbcd | SAMEA3472110_00724 | Not Available | Positive | 780309 - 781511 | 44792.2 |
| exonuclease, dsdna, atp-dependent | SAMEA3472110_00725 | Not Available | Positive | 781508 - 784651 | 118621.0 |
| mfs transporter araj | SAMEA3472110_00726 | Not Available | Positive | 784693 - 785961 | 44686.5 |
| fructokinase | SAMEA3472110_00727 | Not Available | Negative | 786104 - 787012 | 32456.6 |
| exonuclease rdgc | SAMEA3472110_00728 | Not Available | Positive | 787071 - 788048 | 36613.6 |
| conserved protein, upf0345 family | SAMEA3472110_00729 | Not Available | Negative | 788692 - 788976 | 10234.9 |
| putative chorismate biosynthesis protein | SAMEA3472110_00730 | Not Available | Negative | 789048 - 789725 | 24948.5 |
| protein | SAMEA3472110_00731 | Not Available | Negative | 789983 - 790174 | 7281.55 |
| shikimate kinase | SAMEA3472110_00732 | Not Available | Negative | 790224 - 790748 | 19168.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





