Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphatase a | SAMEA3472110_00703 | Not Available | Negative | 758436 - 758951 | 19332.2 |
| thiamine-monophosphate kinase | SAMEA3472110_00704 | Not Available | Negative | 758929 - 759906 | 35084.9 |
| n utilization substance protein b | SAMEA3472110_00705 | Not Available | Negative | 759984 - 760403 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMEA3472110_00706 | Not Available | Negative | 760423 - 760893 | 16206.5 |
| riboflavin biosynthesis protein | SAMEA3472110_00707 | Not Available | Negative | 760982 - 762085 | 40437.8 |
| putative regulatory protein | SAMEA3472110_00708 | Not Available | Negative | 762089 - 762538 | 17229.9 |
| putative lipoprotein | SAMEA3472110_00709 | Not Available | Positive | 762689 - 763228 | 19591.6 |
| nucleoside-specific channel-forming protein tsx | SAMEA3472110_00710 | Not Available | Positive | 763526 - 764410 | 33590.6 |
| putative endonuclease | SAMEA3472110_00711 | Not Available | Negative | 764448 - 764795 | 13364.7 |
| preprotein translocase subunit secf | SAMEA3472110_00712 | Not Available | Negative | 764924 - 765895 | 35384.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





