Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | SAMEA3472110_00672 | Not Available | Negative | 724710 - 725168 | 17438.4 |
| putative hydrolase | SAMEA3472110_00673 | Not Available | Negative | 725321 - 726139 | 30330.6 |
| bacterial extracellular solute-binding protein, family 5 | SAMEA3472110_00674 | Not Available | Positive | 726239 - 727939 | 64957.2 |
| queuosine biosynthesis protein quec | SAMEA3472110_00675 | Not Available | Positive | 728004 - 728699 | 25453.5 |
| thioesterase protein ybaw | SAMEA3472110_00676 | Not Available | Negative | 728751 - 729149 | 15089.2 |
| putative dna uptake protein | SAMEA3472110_00677 | Not Available | Negative | 729243 - 729614 | 12744.4 |
| peptidyl-prolyl cis-trans isomerase d | SAMEA3472110_00678 | Not Available | Negative | 729765 - 731636 | 68153.7 |
| dna-binding protein hu | SAMEA3472110_00679 | Not Available | Negative | 731828 - 732100 | 9226.08 |
| dna-binding atp-dependent protease la | SAMEA3472110_00680 | Not Available | Negative | 732309 - 734663 | 87443.4 |
| atp-dependent specificity component of clpp serine protease | SAMEA3472110_00682 | Not Available | Negative | 734851 - 736125 | 46358.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





