Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-1 fimbrial protein fimi | SAMEA3472110_00609 | Not Available | Negative | 657634 - 658131 | 17692.1 |
| fimbrial protein | SAMEA3472110_00610 | Not Available | Negative | 658238 - 658786 | 18171.3 |
| tyrosine recombinase | SAMEA3472110_00611 | Not Available | Negative | 659581 - 660177 | 23117.6 |
| tyrosine recombinase | SAMEA3472110_00612 | Not Available | Negative | 660655 - 661257 | 22994.8 |
| uncharacterised protein | SAMEA3472110_00613 | Not Available | Positive | 661517 - 661912 | 14710.0 |
| n-acetylneuraminic acid outer membrane porin | SAMEA3472110_00614 | Not Available | Positive | 662709 - 663425 | 27903.4 |
| n-acetylneuraminic acid mutarotase | SAMEA3472110_00615 | Not Available | Positive | 663445 - 664551 | 39602.2 |
| yjhs protein | SAMEA3472110_00616 | Not Available | Positive | 664616 - 665596 | 36859.9 |
| putative restriction endonuclease | SAMEA3472110_00617 | Not Available | Positive | 665808 - 666680 | 33194.7 |
| uncharacterised protein | SAMEA3472110_00618 | Not Available | Negative | 667302 - 669338 | 78832.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





