Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | SAMEA3472110_00558 | Not Available | Positive | 603302 - 605281 | 71864.1 |
| nudix-family hydrolase | SAMEA3472110_00559 | Not Available | Positive | 605349 - 605924 | 21748.0 |
| protein | SAMEA3472110_00560 | Not Available | Positive | 606050 - 607093 | 38729.5 |
| transketolase | SAMEA3472110_00561 | Not Available | Negative | 607196 - 609199 | 73028.7 |
| transaldolase a | SAMEA3472110_00562 | Not Available | Negative | 609219 - 610169 | 35660.7 |
| nadp-dependent malic enzyme | SAMEA3472110_00563 | Not Available | Positive | 610458 - 612737 | 82433.3 |
| ethanolamine utilization protein euts | SAMEA3472110_00564 | Not Available | Positive | 613030 - 613365 | 11650.3 |
| ethanolamine utilization protein | SAMEA3472110_00565 | Not Available | Positive | 613378 - 613857 | 17629.8 |
| ethanolamine utilization protein | SAMEA3472110_00566 | Not Available | Positive | 613832 - 614533 | 25423.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMEA3472110_00567 | Not Available | Positive | 614530 - 615333 | 30115.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





