Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472110_00548 | Not Available | Negative | 590936 - 591166 | 8823.61 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMEA3472110_00549 | Not Available | Positive | 591238 - 591951 | 26980.5 |
| putative peptidase | SAMEA3472110_00550 | Not Available | Positive | 592119 - 592982 | 31462.0 |
| putative atp-dependent acetyltransferase | SAMEA3472110_00551 | Not Available | Positive | 592997 - 595012 | 74788.7 |
| esterase ypfh | SAMEA3472110_00552 | Not Available | Positive | 595086 - 595784 | 24859.4 |
| protein | SAMEA3472110_00553 | Not Available | Negative | 595865 - 596065 | 8071.78 |
| succinyl-diaminopimelate desuccinylase | SAMEA3472110_00554 | Not Available | Negative | 596093 - 597220 | 41271.4 |
| putative glutaredoxin | SAMEA3472110_00555 | Not Available | Negative | 597224 - 597580 | 13587.3 |
| putative multidrug efflux pump | SAMEA3472110_00556 | Not Available | Negative | 598119 - 601232 | 113084.0 |
| nitrate/nitrite sensor protein narq | SAMEA3472110_00557 | Not Available | Negative | 601396 - 603096 | 63673.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





