Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4, membrane subunit hyff | SAMEA3472110_00538 | Not Available | Negative | 580446 - 582026 | 56553.3 |
| hydrogenase-4 component e | SAMEA3472110_00539 | Not Available | Negative | 582031 - 582681 | 23403.1 |
| hydrogenase-4 component d | SAMEA3472110_00540 | Not Available | Negative | 582693 - 584132 | 51757.7 |
| hydrogenase 4, membrane subunit | SAMEA3472110_00541 | Not Available | Negative | 584149 - 585096 | 34396.3 |
| hydrogenase-4 component b | SAMEA3472110_00542 | Not Available | Negative | 585107 - 587125 | 72724.6 |
| hydrogenase 4 fe-s subunit | SAMEA3472110_00543 | Not Available | Negative | 587125 - 587655 | 19098.8 |
| thioredoxin-dependent thiol peroxidase | SAMEA3472110_00544 | Not Available | Negative | 587908 - 588378 | 17634.9 |
| glycine cleavage system transcriptional repressor | SAMEA3472110_00545 | Not Available | Negative | 588378 - 588950 | 20785.8 |
| dihydrodipicolinate synthase | SAMEA3472110_00546 | Not Available | Positive | 589096 - 589974 | 31253.8 |
| lipoprotein | SAMEA3472110_00547 | Not Available | Positive | 589991 - 591025 | 36917.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





