Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate dioxygenase ferredoxin--nad(+) reductase component | SAMEA3472110_00473 | Not Available | Negative | 500150 - 501352 | 43853.5 |
| 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase | SAMEA3472110_00474 | Not Available | Negative | 501362 - 502174 | 28471.3 |
| 3-phenylpropionate dioxygenase ferredoxin subunit | SAMEA3472110_00475 | Not Available | Negative | 502171 - 502491 | 11329.3 |
| 3-phenylpropionate dioxygenase beta subunit | SAMEA3472110_00476 | Not Available | Negative | 502491 - 503009 | 20494.3 |
| 3-phenylpropionate dioxygenase alpha subunit | SAMEA3472110_00477 | Not Available | Negative | 503006 - 504367 | 51081.8 |
| hca operon transcriptional activator | SAMEA3472110_00478 | Not Available | Positive | 504503 - 505393 | 32813.2 |
| putative 3-phenylpropionate permease | SAMEA3472110_00479 | Not Available | Positive | 505553 - 506692 | 41581.1 |
| stationary phase inducible protein csie | SAMEA3472110_00480 | Not Available | Negative | 506684 - 507964 | 49063.5 |
| peptidase | SAMEA3472110_00481 | Not Available | Negative | 508155 - 509009 | 31556.7 |
| inositol-1-monophosphatase | SAMEA3472110_00482 | Not Available | Negative | 509154 - 509957 | 29173.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





