Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-anhydromuramyl-l-alanine-amidase | SAMEA3472110_00397 | Not Available | Positive | 417910 - 418461 | 20548.2 |
| ampe protein | SAMEA3472110_00398 | Not Available | Positive | 418458 - 419312 | 32153.9 |
| aromatic amino acid transport protein | SAMEA3472110_00399 | Not Available | Negative | 419355 - 420725 | 49528.8 |
| transcriptional regulator protein | SAMEA3472110_00400 | Not Available | Positive | 421269 - 422033 | 29427.2 |
| pyruvate dehydrogenase e1 component | SAMEA3472110_00402 | Not Available | Positive | 422193 - 424856 | 99674.1 |
| dihydrolipoamide acetyltransferase component (e2) of pyruvate dehydrogenase | SAMEA3472110_00403 | Not Available | Positive | 424871 - 426763 | 66127.8 |
| dihydrolipoamide dehydrogenase | SAMEA3472110_00404 | Not Available | Positive | 427088 - 428512 | 50691.4 |
| cdk activating kinase (cak)/rna polymerase ii transcription initiation/nucleotide excision repair factor tfiih/tfiik, cyclin h subunit | SAMEA3472110_00405 | Not Available | Negative | 428583 - 430433 | 69217.4 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | SAMEA3472110_00406 | Not Available | Positive | 430788 - 433385 | 93529.4 |
| uncharacterised protein family (upf0231) | SAMEA3472110_00407 | Not Available | Positive | 433561 - 433923 | 13978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





