Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein signal peptidase | SAMEA3472110_00313 | Not Available | Positive | 324278 - 324772 | 18129.3 |
| fkbb-type 16 kd peptidyl-prolyl cis-trans isomerase | SAMEA3472110_00314 | Not Available | Positive | 324860 - 325309 | 16096.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMEA3472110_00315 | Not Available | Positive | 325311 - 326261 | 34776.6 |
| nonspecific ribonucleoside hydrolase (purine/pyrimidine ribonucleoside hydrolase) | SAMEA3472110_00316 | Not Available | Positive | 326327 - 327241 | 32626.8 |
| dihydrodipicolinate reductase | SAMEA3472110_00317 | Not Available | Positive | 327408 - 328229 | 28772.4 |
| carbamoyl phosphate synthase small subunit | SAMEA3472110_00318 | Not Available | Positive | 328685 - 329833 | 41463.4 |
| carbamoyl-phosphate synthase large subunit | SAMEA3472110_00319 | Not Available | Positive | 329851 - 333069 | 117720.0 |
| uncharacterised protein | SAMEA3472110_00320 | Not Available | Negative | 333077 - 333295 | 8212.92 |
| transcriptional activator | SAMEA3472110_00321 | Not Available | Positive | 333330 - 333725 | 15437.1 |
| carnitine operon protein caie | SAMEA3472110_00322 | Not Available | Negative | 333844 - 334434 | 21176.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





