Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative exonuclease | SAMEA3472110_00001 | Not Available | Positive | 110 - 1024 | 33955.2 |
| rrna,type:5s | Not Available | Not Available | Positive | 21 - 135 | 18.01 |
| rrna,type:5s | Not Available | Not Available | Positive | 205 - 297 | 18.01 |
| Trna-thr; | Not Available | Not Available | Positive | 311 - 386 | Not Available |
| rrna,type:5s | Not Available | Not Available | Positive | 428 - 542 | 18.01 |
| Attl | Not Available | Not Available | Positive | 903 - 914 | Not Available |
| Hypothetical protein | SAMEA3472110_00002 | Not Available | Positive | 1021 - 1590 | 20511.7 |
| Trna-phe; | Not Available | Not Available | Positive | 1410 - 1485 | Not Available |
| Hypothetical protein | SAMEA3472110_00003 | Not Available | Positive | 1590 - 1772 | 6631.18 |
| Putative excisionase | SAMEA3472110_00004 | Not Available | Positive | 1982 - 2245 | 10133.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





