Ruminococcaceae bacterium strain R-25

Obligate anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium strain R-25 is an obligate anaerobe belonging to the family Ruminococcaceae. This strain has been identified in hosts from the genus Bos, which includes cattle and other bovines. It is characterized by its uncharacterized Gram staining properties, indicating that its specific Gram reaction has not been defined. The genomic structure of R. bacterium strain R-25 includes two replicons, suggesting a complex genetic organization that may contribute to its adaptability in anaerobic environments. The strain is documented in two genetic accessions, UHJI00000000.1 and QGFZ00000000.1, which serve as references for its genomic data. The presence of Ruminococcaceae bacterium strain R-25 in Bos hosts highlights its potential role in the gut microbiome of ruminants. As an obligate anaerobe, it likely participates in the fermentation processes essential for the digestion of complex carbohydrates, contributing to the overall health and metabolic efficiency of its host. This insight underscores the importance of understanding microbial diversity within the gastrointestinal tract of ruminants, as it plays a critical role in nutrient absorption and fermentation, influencing both host health and agricultural productivity.

Profile

Physiology
Gram staining propertiesUncharacterized
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium strain R-25 genome assembly, contig:

Gene Summary

Adenine Count

853217 bp

Thymine Count

838844 bp

Guanine Count

696180 bp

Cytosine Count

679320 bp

Genome Length

3067561 bp

Protein-coding Genes

2712 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinB0O40_1918Not AvailableNegative2122720 - 212313915192.2
hypothetical proteinB0O40_1919Not AvailableNegative2123147 - 212469756808.3
nanornase/pap phosphatase (c-di-amp/oligornas hydrolase)B0O40_1920Not AvailablePositive2124908 - 212583735162.1
hypothetical proteinB0O40_1921Not AvailablePositive2125895 - 212717548058.5
hypothetical proteinB0O40_1922Not AvailablePositive2127270 - 212803728114.3
hypothetical proteinB0O40_1923Not AvailablePositive2128052 - 212933248296.1
hypothetical proteinB0O40_1924Not AvailablePositive2129474 - 212981812167.2
putative tyrosine transporter p-proteinB0O40_1925Not AvailableNegative2130169 - 213144646386.0
putative flippase gtraB0O40_1926Not AvailableNegative2131462 - 213257441617.1
kef-type k+ transport system membrane component kefbB0O40_1927Not AvailableNegative2132606 - 213378142028.0

Displaying genes 4661 – 4670 of 5520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.