Yokenella regensburgei strain NCTC11966

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Yokenella

Description

Yokenella regensburgei strain NCTC11966 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number UHJH00000000.1, which serves as a reference for its genetic material in databases. This single-replicon feature may suggest a simplified replication process compared to other bacteria with multiple replicons, potentially impacting its growth and adaptation in various environments. Yokenella regensburgei is part of the Enterobacteriaceae family and is known to be associated with human infections, though its ecological niche and specific pathogenic mechanisms require further study. The presence of a single replicon may allow for efficient regulation of gene expression and replication in response to environmental changes, which can be crucial for survival and competitiveness in diverse habitats. From a biological perspective, the traits of Yokenella regensburgei strain NCTC11966 highlight its potential adaptability in different ecological niches, particularly in environments where resource availability fluctuates. Understanding the genomic structure and characteristics of this strain can provide insights into its role within microbial communities and its interactions with hosts, contributing to a broader comprehension of its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusYokenella
SpeciesYokenella regensburgei
Strainstrain NCTC11966

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Yokenella regensburgei strain NCTC11966
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yokenella regensburgei strain NCTC11966 genome assembly, contig:

Gene Summary

Adenine Count

1113811 bp

Thymine Count

1120385 bp

Guanine Count

1353032 bp

Cytosine Count

1350297 bp

Genome Length

4937525 bp

Protein-coding Genes

4410 genes

Non-Coding Genes

321 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytosol aminopeptidaseNCTC11966_04266Not AvailablePositive4399950 - 440146154839.1
dna polymerase iii subunit chiNCTC11966_04267Not AvailablePositive4401468 - 440202520321.9
valine--trna ligaseNCTC11966_04268Not AvailablePositive4402025 - 4404880108017.0
enterobacterial putative membrane protein (duf943)NCTC11966_04269Not AvailableNegative4404920 - 440545621013.2
protein of uncharacterised function (duf3289)NCTC11966_04270Not AvailableNegative4405453 - 440630433151.4
predicted acetyltransferaseNCTC11966_04271Not AvailablePositive4406509 - 440700918130.8
pp_04102NCTC11966_04272Not AvailableNegative4407030 - 4407788Not Available
regulator of ribonuclease activity bNCTC11966_04273Not AvailableNegative4407837 - 440826216026.0
ornithine carbamoyltransferase chain iNCTC11966_04274Not AvailablePositive4408426 - 440943036931.3
toxin-antitoxin biofilm protein tabaNCTC11966_04275Not AvailableNegative4409470 - 440992216810.2

Displaying genes 4251 – 4260 of 4731 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.