Yokenella regensburgei strain NCTC11966

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Yokenella

Description

Yokenella regensburgei strain NCTC11966 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number UHJH00000000.1, which serves as a reference for its genetic material in databases. This single-replicon feature may suggest a simplified replication process compared to other bacteria with multiple replicons, potentially impacting its growth and adaptation in various environments. Yokenella regensburgei is part of the Enterobacteriaceae family and is known to be associated with human infections, though its ecological niche and specific pathogenic mechanisms require further study. The presence of a single replicon may allow for efficient regulation of gene expression and replication in response to environmental changes, which can be crucial for survival and competitiveness in diverse habitats. From a biological perspective, the traits of Yokenella regensburgei strain NCTC11966 highlight its potential adaptability in different ecological niches, particularly in environments where resource availability fluctuates. Understanding the genomic structure and characteristics of this strain can provide insights into its role within microbial communities and its interactions with hosts, contributing to a broader comprehension of its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusYokenella
SpeciesYokenella regensburgei
Strainstrain NCTC11966

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Yokenella regensburgei strain NCTC11966
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yokenella regensburgei strain NCTC11966 genome assembly, contig:

Gene Summary

Adenine Count

1113811 bp

Thymine Count

1120385 bp

Guanine Count

1353032 bp

Cytosine Count

1350297 bp

Genome Length

4937525 bp

Protein-coding Genes

4410 genes

Non-Coding Genes

321 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hth-type transcriptional regulatory protein gabrNCTC11966_03693Not AvailableNegative3807178 - 380862952948.2
putative ribosomal n-acetyltransferase ydafNCTC11966_03694Not AvailablePositive3808731 - 380943826949.8
50s ribosomal protein l36 2NCTC11966_03695Not AvailableNegative3809435 - 38095755451.89
50s ribosomal protein l31 type bNCTC11966_03696Not AvailableNegative3809578 - 38098389992.68
2-oxoglutarate-dependent ethylene/succinate-forming enzymeNCTC11966_03697Not AvailablePositive3810232 - 381125438378.4
29 kda proteinNCTC11966_03698Not AvailablePositive3811282 - 381208828702.6
methionine import atp-binding protein metn 2NCTC11966_03699Not AvailablePositive3812085 - 381287628626.7
d-methionine transport system permease protein metiNCTC11966_03700Not AvailablePositive3812861 - 381353223729.1
uncharacterized membrane protein yjccNCTC11966_03701Not AvailablePositive3813602 - 381516158966.4
uncharacterized conserved proteinNCTC11966_03702Not AvailableNegative3815197 - 381555013249.9

Displaying genes 3691 – 3700 of 4731 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.