Yokenella regensburgei strain NCTC11966

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Yokenella

Description

Yokenella regensburgei strain NCTC11966 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number UHJH00000000.1, which serves as a reference for its genetic material in databases. This single-replicon feature may suggest a simplified replication process compared to other bacteria with multiple replicons, potentially impacting its growth and adaptation in various environments. Yokenella regensburgei is part of the Enterobacteriaceae family and is known to be associated with human infections, though its ecological niche and specific pathogenic mechanisms require further study. The presence of a single replicon may allow for efficient regulation of gene expression and replication in response to environmental changes, which can be crucial for survival and competitiveness in diverse habitats. From a biological perspective, the traits of Yokenella regensburgei strain NCTC11966 highlight its potential adaptability in different ecological niches, particularly in environments where resource availability fluctuates. Understanding the genomic structure and characteristics of this strain can provide insights into its role within microbial communities and its interactions with hosts, contributing to a broader comprehension of its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusYokenella
SpeciesYokenella regensburgei
Strainstrain NCTC11966

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Yokenella regensburgei strain NCTC11966
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yokenella regensburgei strain NCTC11966 genome assembly, contig:

Gene Summary

Adenine Count

1113811 bp

Thymine Count

1120385 bp

Guanine Count

1353032 bp

Cytosine Count

1350297 bp

Genome Length

4937525 bp

Protein-coding Genes

4410 genes

Non-Coding Genes

321 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
invasion protein iagbNCTC11966_02252Not AvailableNegative2295391 - 229589418992.1
uncharacterised proteinNCTC11966_02253Not AvailableNegative2295939 - 229629513730.9
uncharacterised proteinNCTC11966_02254Not AvailableNegative2296288 - 229696826413.4
invasion protein orgaNCTC11966_02255Not AvailableNegative2296949 - 229750020706.4
lipoprotein prgk precursorNCTC11966_02256Not AvailableNegative2297497 - 229826728042.7
type iii secretion system needle complex protein prgjNCTC11966_02257Not AvailableNegative2298267 - 229859011975.0
type iii secretion system needle complex protein prgiNCTC11966_02258Not AvailableNegative2298641 - 22989049614.17
type iii secretion system needle complex protein prghNCTC11966_02259Not AvailableNegative2298897 - 230017148762.2
transcriptional regulator invfNCTC11966_02260Not AvailablePositive2300601 - 230147032628.1
type iii secretion system outer membrane pore invgNCTC11966_02261Not AvailablePositive2301463 - 230324464498.4

Displaying genes 2331 – 2340 of 4731 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.