Yokenella regensburgei strain NCTC11966

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Yokenella

Description

Yokenella regensburgei strain NCTC11966 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number UHJH00000000.1, which serves as a reference for its genetic material in databases. This single-replicon feature may suggest a simplified replication process compared to other bacteria with multiple replicons, potentially impacting its growth and adaptation in various environments. Yokenella regensburgei is part of the Enterobacteriaceae family and is known to be associated with human infections, though its ecological niche and specific pathogenic mechanisms require further study. The presence of a single replicon may allow for efficient regulation of gene expression and replication in response to environmental changes, which can be crucial for survival and competitiveness in diverse habitats. From a biological perspective, the traits of Yokenella regensburgei strain NCTC11966 highlight its potential adaptability in different ecological niches, particularly in environments where resource availability fluctuates. Understanding the genomic structure and characteristics of this strain can provide insights into its role within microbial communities and its interactions with hosts, contributing to a broader comprehension of its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusYokenella
SpeciesYokenella regensburgei
Strainstrain NCTC11966

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Yokenella regensburgei strain NCTC11966
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yokenella regensburgei strain NCTC11966 genome assembly, contig:

Gene Summary

Adenine Count

1113811 bp

Thymine Count

1120385 bp

Guanine Count

1353032 bp

Cytosine Count

1350297 bp

Genome Length

4937525 bp

Protein-coding Genes

4410 genes

Non-Coding Genes

321 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
colonization factor antigen i subunit eNCTC11966_01749Not AvailablePositive1772134 - 177324940393.2
sensor kinase protein rcscNCTC11966_01750Not AvailablePositive1773255 - 1776188109667.0
capsular synthesis regulator component bNCTC11966_01751Not AvailableNegative1776221 - 177687123676.0
sensor-like histidine kinase rcsdNCTC11966_01752Not AvailableNegative1776888 - 177954298863.1
porin ompnNCTC11966_01754Not AvailablePositive1780303 - 178144541468.3
thiamine biosynthesis lipoprotein apbe precursorNCTC11966_01755Not AvailablePositive1781550 - 178260538291.7
regulatory protein of adaptative responseNCTC11966_01756Not AvailablePositive1782678 - 178374238909.7
alpha-ketoglutarate-dependent dioxygenase alkbNCTC11966_01757Not AvailablePositive1783742 - 178439223545.2
abc transporter atp-binding protein yojiNCTC11966_01758Not AvailablePositive1784467 - 178611061967.0
magnesium transporter mgteNCTC11966_01759Not AvailablePositive1786143 - 178757952702.3

Displaying genes 1841 – 1850 of 4731 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.