Yersinia frederiksenii strain NCTC11470

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia frederiksenii strain NCTC11470 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This strain is notable for its environmental and food habitat, indicating its potential association with both ecological systems and food sources. Yersinia frederiksenii is known to inhabit various environments and has been identified in food, suggesting that it might play a role in food safety and quality. The presence of this bacterium in food could pose health risks to humans, as it has been associated with infections in Homo sapiens, as well as in other Metazoa. This dual-host capability highlights its adaptability and potential impact on both human and animal health. The strain NCTC11470 has a singular replicon, which is relevant for understanding its genetic stability and potential for horizontal gene transfer. This characteristic might influence the bacterium's adaptability to different environments and hosts, a significant factor in microbial ecology. In summary, Yersinia frederiksenii strain NCTC11470 is a motile, Gram-negative rod that thrives in environmental and food contexts, with implications for human and animal health. Its presence in food systems and ability to infect diverse hosts underscore the importance of monitoring and controlling this bacterium in public health and food safety initiatives.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia frederiksenii
Strainstrain NCTC11470

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia frederiksenii strain NCTC11470
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatenvironment; food
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia frederiksenii strain NCTC11470 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4159 genes

Non-Coding Genes

366 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inner membrane permease of oligogalacturonide abc transporterNCTC11470_00293Not AvailableNegative258249 - 25916934862.4
putative abc sugar transporter (permease)NCTC11470_00294Not AvailableNegative259162 - 26005233340.9
exopolygalacturonate lyaseNCTC11470_00295Not AvailableNegative260093 - 26182666737.4
2-deoxy-d-gluconate 3-dehydrogenaseNCTC11470_00296Not AvailableNegative262088 - 26284927358.1
5-keto-4-deoxyuronate isomeraseNCTC11470_00297Not AvailableNegative262959 - 26379531096.1
pectin degradation proteinNCTC11470_00298Not AvailablePositive264127 - 26445912516.0
2-deoxyglucose-6-phosphataseNCTC11470_00299Not AvailableNegative264561 - 26522624708.0
putative yfeabcd locus regulatorNCTC11470_00300Not AvailablePositive265475 - 26602921116.2
lysr family transcriptional regulatorNCTC11470_00301Not AvailablePositive266260 - 26712633163.8
putative 4-hydroxybutyrate coenzyme a transferaseNCTC11470_00302Not AvailableNegative267123 - 26860453966.1

Displaying genes 471 – 480 of 4525 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.