Pseudoalteromonas nigrifaciens strain NCTC10691

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas nigrifaciens strain NCTC10691 is a rod-shaped bacterium recognized for its distinct characteristics within the Pseudoalteromonas genus. This strain is notable for having a single replicon, which is an important feature in understanding its genomic structure and replication mechanics. The complete genomic sequence of this strain is documented under the accession number UGUD00000000.1, providing a valuable resource for researchers interested in its genetic composition. Pseudoalteromonas nigrifaciens is typically isolated from marine environments, where it plays a significant role in the microbial community. Its rod shape and adaptability to various environmental conditions suggest a potential for diverse metabolic activities, which may include the degradation of organic matter and the production of biocompounds. The ecological significance of Pseudoalteromonas nigrifaciens strain NCTC10691 lies in its potential contributions to marine ecosystems, particularly in nutrient cycling and interaction with other microorganisms. As a member of the marine microbiome, it may influence the health and stability of its environment, demonstrating the importance of studying such strains to gain insights into microbial dynamics and ecological interactions in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas nigrifaciens
Strainstrain NCTC10691

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas nigrifaciens strain NCTC10691 genome assembly,

Gene Summary

Adenine Count

1279857 bp

Thymine Count

1278042 bp

Guanine Count

862376 bp

Cytosine Count

855154 bp

Genome Length

4275429 bp

Protein-coding Genes

3738 genes

Non-Coding Genes

250 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of uncharacterised function (duf3192)NCTC10691_03748Not AvailableNegative3968826 - 396920914858.9
exonuclease ixNCTC10691_03749Not AvailableNegative3969279 - 397005229027.8
log family protein ygdhNCTC10691_03750Not AvailableNegative3970061 - 397140450155.9
probable diguanylate cyclase ydamNCTC10691_03751Not AvailableNegative3971621 - 397315657834.6
predicted protease with the c-terminal pdz domainNCTC10691_03752Not AvailablePositive3973361 - 397514867181.4
pas domain s-box proteinNCTC10691_03753Not AvailablePositive3975314 - 397569114207.8
cyclic di-gmp phosphodiesterase gmrNCTC10691_03754Not AvailablePositive3975669 - 397703352182.0
transposase and inactivated derivativesNCTC10691_03755Not AvailableNegative3976937 - 397742819100.3
probable transposaseNCTC10691_03756Not AvailablePositive3977467 - 397869346551.4
v8-like glu-specific endopeptidaseNCTC10691_03757Not AvailablePositive3978937 - 398110880833.6

Displaying genes 3731 – 3740 of 3988 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.