Pseudoalteromonas nigrifaciens strain NCTC10691

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas nigrifaciens strain NCTC10691 is a rod-shaped bacterium recognized for its distinct characteristics within the Pseudoalteromonas genus. This strain is notable for having a single replicon, which is an important feature in understanding its genomic structure and replication mechanics. The complete genomic sequence of this strain is documented under the accession number UGUD00000000.1, providing a valuable resource for researchers interested in its genetic composition. Pseudoalteromonas nigrifaciens is typically isolated from marine environments, where it plays a significant role in the microbial community. Its rod shape and adaptability to various environmental conditions suggest a potential for diverse metabolic activities, which may include the degradation of organic matter and the production of biocompounds. The ecological significance of Pseudoalteromonas nigrifaciens strain NCTC10691 lies in its potential contributions to marine ecosystems, particularly in nutrient cycling and interaction with other microorganisms. As a member of the marine microbiome, it may influence the health and stability of its environment, demonstrating the importance of studying such strains to gain insights into microbial dynamics and ecological interactions in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas nigrifaciens
Strainstrain NCTC10691

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas nigrifaciens strain NCTC10691 genome assembly,

Gene Summary

Adenine Count

1279857 bp

Thymine Count

1278042 bp

Guanine Count

862376 bp

Cytosine Count

855154 bp

Genome Length

4275429 bp

Protein-coding Genes

3738 genes

Non-Coding Genes

250 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposase and inactivated derivativesNCTC10691_03263Not AvailablePositive3420888 - 342238156637.7
chromosomal replication initiator protein dnaaNCTC10691_03264Not AvailablePositive3422374 - 342312628490.4
elongation factor g 1NCTC10691_03265Not AvailableNegative3423454 - 342553876074.9
transcriptional regulatory protein cittNCTC10691_03266Not AvailableNegative3425738 - 342646326592.3
sensor histidine kinase dpibNCTC10691_03267Not AvailableNegative3426479 - 342810159240.1
tripartite tricarboxylate transporter tcta familyNCTC10691_03268Not AvailableNegative3428114 - 342964653895.7
tripartite tricarboxylate transporter tctb familyNCTC10691_03269Not AvailableNegative3429650 - 343011717224.7
tripartite tricarboxylate transporter family receptorNCTC10691_03270Not AvailableNegative3430130 - 343111035027.3
outer membrane protein d1NCTC10691_03271Not AvailableNegative3431122 - 343236344845.0
succinyl-coa:3-ketoacid-coenzyme a transferase subunit bNCTC10691_03272Not AvailableNegative3432667 - 343332323131.2

Displaying genes 3251 – 3260 of 3988 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.