Plesiomonas shigelloides strain NCTC10363

Gram-negativeVibrioMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Plesiomonas

Description

Plesiomonas shigelloides strain NCTC10363 is a Gram-negative bacterium that exhibits a vibrio shape and is characterized as a chemoheterotroph. This strain is aerobe, requiring oxygen for growth, and thrives optimally at a temperature of 30°C within a mesophilic temperature range. The bacterium is motile, possessing flagella that facilitate its movement. P. shigelloides is known to inhabit multiple environments, which may include aquatic ecosystems, as it is associated with catfish as a host. This relationship underscores the ecological significance of the bacterium, potentially playing a role in the microbiome of aquatic species and influencing fish health and disease dynamics. The strain possesses a single replicon and does not form spores, which may affect its survival and replication strategies in varying environments. The presence of a single replicon suggests a streamlined genetic organization, possibly contributing to its adaptability in diverse habitats. Overall, the traits of Plesiomonas shigelloides strain NCTC10363 indicate its potential ecological roles in aquatic environments, particularly in relation to its host catfish, which may serve as a reservoir or vector for this bacterium in natural ecosystems. Understanding the interactions between this bacterium and its aquatic hosts could provide insights into microbial dynamics in freshwater habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusPlesiomonas
SpeciesPlesiomonas shigelloides
Strainstrain NCTC10363

Profile

Physiology
Gram staining propertiesNegative
ShapeVibrio
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Plesiomonas shigelloides strain NCTC10363
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)catfish
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Plesiomonas shigelloides strain NCTC10363 genome assembly, contig:

Gene Summary

Adenine Count

925107 bp

Thymine Count

931263 bp

Guanine Count

989564 bp

Cytosine Count

993162 bp

Genome Length

3839096 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

307 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
galactose-1-phosphate uridylyltransferaseNCTC10363_03429Not AvailableNegative3729287 - 373036640760.0
ribose operon repressorNCTC10363_03430Not AvailablePositive3730826 - 373180936217.4
evolved beta-galactosidase subunit alphaNCTC10363_03431Not AvailablePositive3732189 - 3735293118413.0
evolved beta-galactosidase subunit betaNCTC10363_03432Not AvailablePositive3735297 - 373574617296.5
inner membrane transporter ygjiNCTC10363_03433Not AvailablePositive3735865 - 373731052332.7
bacillibactin transport regulatorNCTC10363_03434Not AvailableNegative3737380 - 373829433543.9
inner membrane protein ykgbNCTC10363_03435Not AvailablePositive3738418 - 373889117353.5
predicted membrane proteinNCTC10363_03436Not AvailablePositive3738994 - 373935312728.1
malate-2h(+)/na(+)-lactate antiporterNCTC10363_03437Not AvailableNegative3739398 - 374084650497.1
urease operon transcriptional activatorNCTC10363_03438Not AvailableNegative3740998 - 374176828796.8

Displaying genes 3401 – 3410 of 3487 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

280 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da

Displaying 1–10 of 280 metabolites

Health Effects

No health effects information available for this bacterium.