Pannonibacter phragmitetus strain NCTC13350

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain NCTC13350 is a bacterial strain characterized by a single replicon, indicating a streamlined genetic structure. The genomic data for this strain is cataloged under the accession number UGSK00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. As a member of the Pannonibacter genus, Pannonibacter phragmitetus is likely associated with specific ecological niches, particularly in wetland environments. This genus is known for its ability to thrive in diverse habitats, suggesting that Pannonibacter phragmitetus may play a role in the microbiomes of such ecosystems. The presence of a single replicon could imply a level of genetic stability, which may be advantageous for survival and adaptation in fluctuating environments typical of wetlands. Understanding the traits of Pannonibacter phragmitetus, particularly its single replicon, allows researchers to explore its potential contributions to microbial diversity and ecosystem functioning. Its ecological role could be significant in nutrient cycling and interactions with other microbial species, potentially influencing the overall health and dynamics of its habitat. Further studies on this strain may reveal insights into its specific functions and interactions within its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain NCTC13350

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain NCTC13350 genome assembly,

Gene Summary

Adenine Count

898565 bp

Thymine Count

886307 bp

Guanine Count

1522235 bp

Cytosine Count

1530380 bp

Genome Length

4837487 bp

Protein-coding Genes

4201 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
probable cysteine desulfuraseNCTC13350_00049Not AvailablePositive57973 - 5941251006.5
regulatory protein of adaptative responseNCTC13350_00050Not AvailablePositive59491 - 6040233005.4
signal transduction histidine-protein kinase baraNCTC13350_00051Not AvailablePositive60544 - 6293184972.0
uncharacterised proteinNCTC13350_00052Not AvailablePositive63156 - 6410635740.2
penicillin-binding protein 4 precursorNCTC13350_00053Not AvailablePositive64294 - 6648078155.6
protein of uncharacterised function duf45NCTC13350_00054Not AvailableNegative66481 - 6721827070.8
protein of uncharacterised function (duf2852)NCTC13350_00055Not AvailableNegative67498 - 6791115742.7
rrp-s2NCTC13350_00056Not AvailableNegative68201 - 6985360753.3
uncharacterised proteinNCTC13350_00057Not AvailableNegative70278 - 704968048.93
oxygen-independent coproporphyrinogen-iii oxidaseNCTC13350_00058Not AvailableNegative70913 - 7207043141.0

Displaying genes 71 – 80 of 4278 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.