Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative colanic biosynthesis udp-glucose lipid carrier transferase | NCTC13350_00039 | Not Available | Negative | 46765 - 47352 | 22017.3 |
| uncharacterised protein | NCTC13350_00040 | Not Available | Negative | 47349 - 48929 | 57292.4 |
| udp-glucose 6-dehydrogenase ywqf | NCTC13350_00041 | Not Available | Negative | 49208 - 50449 | 44936.6 |
| udp-n-acetylglucosamine 2-epimerase | NCTC13350_00042 | Not Available | Negative | 50433 - 51515 | 39547.9 |
| dtdp-glucose 4,6-dehydratase | NCTC13350_00043 | Not Available | Positive | 51822 - 52877 | 39338.0 |
| dtdp-4-dehydrorhamnose reductase | NCTC13350_00044 | Not Available | Positive | 52874 - 53782 | 32634.4 |
| glucose-1-phosphate thymidylyltransferase 1 | NCTC13350_00045 | Not Available | Positive | 53751 - 54656 | 33133.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | NCTC13350_00046 | Not Available | Positive | 54653 - 55198 | 20273.7 |
| udp-glucose 4-epimerase | NCTC13350_00047 | Not Available | Negative | 55306 - 57246 | 70282.2 |
| leucine-responsive regulatory protein | NCTC13350_00048 | Not Available | Negative | 57381 - 57851 | 18085.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
