Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase | NCTC13350_00603 | Not Available | Positive | 648460 - 649302 | 32166.2 |
| cyclic di-gmp phosphodiesterase gmr | NCTC13350_00604 | Not Available | Negative | 649345 - 651438 | 78367.1 |
| kynurenine formamidase | NCTC13350_00605 | Not Available | Positive | 652125 - 652760 | 22672.2 |
| lipopolysaccharide export system atp-binding protein lptb | NCTC13350_00606 | Not Available | Positive | 652831 - 653601 | 28200.3 |
| liv-i protein f | NCTC13350_00607 | Not Available | Positive | 653598 - 654305 | 25490.0 |
| liv-i protein h | NCTC13350_00608 | Not Available | Positive | 654318 - 655190 | 31029.5 |
| leucine/isoleucine/valine transporter permease subunit | NCTC13350_00609 | Not Available | Positive | 655206 - 656171 | 34618.1 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor | NCTC13350_00610 | Not Available | Positive | 656235 - 657440 | 40591.1 |
| protein of uncharacterised function, duf486 | NCTC13350_00611 | Not Available | Negative | 657541 - 657888 | 12906.2 |
| hemin uptake protein | NCTC13350_00612 | Not Available | Negative | 658007 - 658228 | 8192.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
