Pannonibacter phragmitetus strain NCTC13350

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain NCTC13350 is a bacterial strain characterized by a single replicon, indicating a streamlined genetic structure. The genomic data for this strain is cataloged under the accession number UGSK00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. As a member of the Pannonibacter genus, Pannonibacter phragmitetus is likely associated with specific ecological niches, particularly in wetland environments. This genus is known for its ability to thrive in diverse habitats, suggesting that Pannonibacter phragmitetus may play a role in the microbiomes of such ecosystems. The presence of a single replicon could imply a level of genetic stability, which may be advantageous for survival and adaptation in fluctuating environments typical of wetlands. Understanding the traits of Pannonibacter phragmitetus, particularly its single replicon, allows researchers to explore its potential contributions to microbial diversity and ecosystem functioning. Its ecological role could be significant in nutrient cycling and interactions with other microbial species, potentially influencing the overall health and dynamics of its habitat. Further studies on this strain may reveal insights into its specific functions and interactions within its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain NCTC13350

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain NCTC13350 genome assembly,

Gene Summary

Adenine Count

898565 bp

Thymine Count

886307 bp

Guanine Count

1522235 bp

Cytosine Count

1530380 bp

Genome Length

4837487 bp

Protein-coding Genes

4201 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted signal-transduction protein containing camp-binding and cbs domainsNCTC13350_03999Not AvailableNegative4460755 - 446125518426.7
alkaline phosphatase synthesis transcriptional regulatory protein sphrNCTC13350_04000Not AvailableNegative4461281 - 446196425284.2
uncharacterized protein conserved in bacteriaNCTC13350_04001Not AvailablePositive4462135 - 446270120747.2
diaminopimelate epimeraseNCTC13350_04002Not AvailablePositive4462887 - 446380733083.3
(dimethylallyl)adenosine trna methylthiotransferase miabNCTC13350_04003Not AvailablePositive4463804 - 446507246501.3
cell division protein ftsyNCTC13350_04004Not AvailablePositive4465106 - 446635343674.0
uncharacterised proteinNCTC13350_04005Not AvailableNegative4466729 - 446716015320.5
7-cyano-7-deazaguanine synthaseNCTC13350_04006Not AvailablePositive4467418 - 446810724706.3
6-carboxy-5,6,7,8-tetrahydropterin synthaseNCTC13350_04007Not AvailablePositive4468100 - 446848614727.4
7-carboxy-7-deazaguanine synthaseNCTC13350_04008Not AvailablePositive4468483 - 446921126231.5

Displaying genes 3971 – 3980 of 4278 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.