Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease operon transcriptional activator | NCTC13350_03889 | Not Available | Negative | 4338875 - 4339690 | 30493.7 |
| dna polymerase iii subunit tau | NCTC13350_03890 | Not Available | Negative | 4339708 - 4341699 | 70652.1 |
| soluble hydrogenase 42 kda subunit | NCTC13350_03891 | Not Available | Negative | 4342040 - 4343230 | 42427.7 |
| predicted n-formylglutamate amidohydrolase | NCTC13350_03892 | Not Available | Positive | 4343517 - 4344362 | 31378.8 |
| acyl-coa dehydrogenase, short-chain specific | NCTC13350_03893 | Not Available | Negative | 4344518 - 4345726 | 44217.9 |
| gcv operon activator | NCTC13350_03894 | Not Available | Positive | 4345862 - 4346797 | 35149.5 |
| putative dmt superfamily transporter inner membrane protein | NCTC13350_03895 | Not Available | Negative | 4346801 - 4347706 | 31488.4 |
| putative nad(p)h nitroreductase yodc | NCTC13350_03896 | Not Available | Negative | 4347723 - 4348349 | 21915.5 |
| d-malate degradation protein r | NCTC13350_03897 | Not Available | Positive | 4348476 - 4349441 | 35290.5 |
| mapeg family | NCTC13350_03898 | Not Available | Positive | 4349507 - 4349884 | 13734.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
