Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system atp-binding protein lptb | NCTC13350_00352 | Not Available | Positive | 378094 - 378885 | 28812.7 |
| rna polymerase factor sigma-54 | NCTC13350_00353 | Not Available | Positive | 378958 - 380526 | 57152.5 |
| ribosome-associated factor y | NCTC13350_00354 | Not Available | Positive | 380789 - 381400 | 22291.3 |
| nitrogen regulatory protein | NCTC13350_00355 | Not Available | Positive | 381477 - 381947 | 16648.2 |
| putative phosphonate catabolism associated alcohol dehydrogenase | NCTC13350_00356 | Not Available | Positive | 382139 - 383149 | 35803.1 |
| queuosine biosynthesis protein qued | NCTC13350_00357 | Not Available | Positive | 383154 - 383555 | 14665.4 |
| mannosylfructose-phosphate synthase | NCTC13350_00358 | Not Available | Positive | 383552 - 384637 | 38167.0 |
| uncharacterised protein | NCTC13350_00359 | Not Available | Positive | 384658 - 385470 | 27910.7 |
| riboflavin biosynthesis protein ribd | NCTC13350_00360 | Not Available | Negative | 385535 - 386272 | 26383.3 |
| cytochrome b561 homolog 2 | NCTC13350_00361 | Not Available | Positive | 386676 - 387209 | 19575.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
