Pannonibacter phragmitetus strain NCTC13350

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain NCTC13350 is a bacterial strain characterized by a single replicon, indicating a streamlined genetic structure. The genomic data for this strain is cataloged under the accession number UGSK00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. As a member of the Pannonibacter genus, Pannonibacter phragmitetus is likely associated with specific ecological niches, particularly in wetland environments. This genus is known for its ability to thrive in diverse habitats, suggesting that Pannonibacter phragmitetus may play a role in the microbiomes of such ecosystems. The presence of a single replicon could imply a level of genetic stability, which may be advantageous for survival and adaptation in fluctuating environments typical of wetlands. Understanding the traits of Pannonibacter phragmitetus, particularly its single replicon, allows researchers to explore its potential contributions to microbial diversity and ecosystem functioning. Its ecological role could be significant in nutrient cycling and interactions with other microbial species, potentially influencing the overall health and dynamics of its habitat. Further studies on this strain may reveal insights into its specific functions and interactions within its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain NCTC13350

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain NCTC13350 genome assembly,

Gene Summary

Adenine Count

898565 bp

Thymine Count

886307 bp

Guanine Count

1522235 bp

Cytosine Count

1530380 bp

Genome Length

4837487 bp

Protein-coding Genes

4201 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma-32 factorNCTC13350_03669Not AvailablePositive4098688 - 409955732912.4
uncharacterized metalloprotease ygggNCTC13350_03670Not AvailableNegative4099777 - 410124652060.9
uncharacterised proteinNCTC13350_03671Not AvailableNegative4101269 - 410214130905.2
Trna-argNot AvailableNot AvailablePositive4102437 - 4102513Not Available
uncharacterised proteinNCTC13350_03673Not AvailableNegative4103550 - 41038109265.14
1,5-anhydro-d-fructose reductaseNCTC13350_03674Not AvailableNegative4103927 - 410494036711.1
polyphosphate kinase 2NCTC13350_03675Not AvailableNegative4105081 - 410600136358.5
putative thiamine biosynthesis protein hi_0357NCTC13350_03676Not AvailableNegative4106389 - 410738435566.5
glycerol-3-phosphate regulon repressorNCTC13350_03677Not AvailablePositive4107874 - 410865928578.2
sulfate/thiosulfate import atp-binding protein cysaNCTC13350_03678Not AvailableNegative4108667 - 410977938972.4

Displaying genes 3641 – 3650 of 4278 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.