Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein, marc family | NCTC13350_02107 | Not Available | Positive | 2305028 - 2305675 | 22535.2 |
| cation efflux system protein czca | NCTC13350_02108 | Not Available | Negative | 2305734 - 2308970 | 114500.0 |
| putative efflux pump membrane fusion protein | NCTC13350_02109 | Not Available | Negative | 2308967 - 2310004 | 36408.8 |
| chat domain | NCTC13350_02110 | Not Available | Negative | 2310126 - 2313209 | 112545.0 |
| dihydrodipicolinate synthase | NCTC13350_02111 | Not Available | Negative | 2313431 - 2314363 | 34386.4 |
| neu5ac permease | NCTC13350_02112 | Not Available | Negative | 2314398 - 2315693 | 45635.3 |
| trap-type c4-dicarboxylate transport system, small permease component | NCTC13350_02113 | Not Available | Negative | 2315690 - 2316232 | 20203.8 |
| neu5ac-binding protein | NCTC13350_02114 | Not Available | Negative | 2316251 - 2317252 | 36800.0 |
| transcriptional regulators | NCTC13350_02115 | Not Available | Positive | 2317412 - 2318146 | 26843.7 |
| uncharacterized hth-type transcriptional regulator ydfh | NCTC13350_02116 | Not Available | Negative | 2318167 - 2318847 | 25355.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
