Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic-ring-opening dioxygenase ligab, liga subunit | NCTC13350_01914 | Not Available | Negative | 2085805 - 2086062 | 9858.84 |
| 2-hydroxymuconic semialdehyde hydrolase | NCTC13350_01915 | Not Available | Negative | 2086059 - 2086886 | 30393.4 |
| neu5ac permease | NCTC13350_01916 | Not Available | Negative | 2086906 - 2088198 | 44467.5 |
| trap-type c4-dicarboxylate transport system, small permease component | NCTC13350_01917 | Not Available | Negative | 2088198 - 2088698 | 18168.8 |
| trap-type mannitol/chloroaromatic compound transport system, periplasmic component | NCTC13350_01918 | Not Available | Negative | 2088712 - 2089761 | 38026.3 |
| long-chain-fatty-acid--coa ligase | NCTC13350_01919 | Not Available | Negative | 2089836 - 2091362 | 54028.4 |
| tetratricopeptide repeat protein | NCTC13350_01920 | Not Available | Negative | 2091813 - 2093576 | 60865.2 |
| homoprotocatechuate degradation operon regulator, hpar | NCTC13350_01921 | Not Available | Positive | 2094060 - 2094587 | 18825.0 |
| gmp synthase | NCTC13350_01922 | Not Available | Positive | 2094712 - 2096283 | 57580.8 |
| is2 repressor tnpa | NCTC13350_01923 | Not Available | Positive | 2096686 - 2097096 | 15319.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
