Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized hth-type transcriptional regulator ttgw | NCTC13350_01904 | Not Available | Positive | 2077321 - 2078073 | 28656.3 |
| 4-hydroxy-2-oxovalerate aldolase | NCTC13350_01905 | Not Available | Negative | 2078076 - 2079101 | 36270.7 |
| acetaldehyde dehydrogenase | NCTC13350_01906 | Not Available | Negative | 2079101 - 2080045 | 33078.2 |
| 2-keto-4-pentenoate hydratase | NCTC13350_01907 | Not Available | Negative | 2080042 - 2080827 | 27178.8 |
| putative enoyl-[acyl-carrier-protein] reductase ii | NCTC13350_01908 | Not Available | Negative | 2080824 - 2081810 | 34440.3 |
| cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | NCTC13350_01909 | Not Available | Negative | 2081810 - 2082619 | 28016.3 |
| biphenyl dioxygenase subunit beta | NCTC13350_01910 | Not Available | Negative | 2082628 - 2083176 | 21819.5 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | NCTC13350_01911 | Not Available | Negative | 2083181 - 2084605 | 53063.5 |
| p3 subunit | NCTC13350_01912 | Not Available | Negative | 2084642 - 2084974 | 11804.0 |
| protocatechuate 4,5-dioxygenase beta chain | NCTC13350_01913 | Not Available | Negative | 2084971 - 2085801 | 29232.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
