Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13350_01742 | Not Available | Negative | 1904835 - 1905215 | 13955.1 |
| uncharacterised protein | NCTC13350_01743 | Not Available | Negative | 1905293 - 1905517 | 8424.9 |
| cold shock protein cspc | NCTC13350_01744 | Not Available | Negative | 1905651 - 1905860 | 7544.88 |
| acetoin catabolism regulatory protein | NCTC13350_01745 | Not Available | Positive | 1906330 - 1908219 | 68099.2 |
| l-threonine 3-dehydrogenase | NCTC13350_01746 | Not Available | Positive | 1908581 - 1909654 | 38131.9 |
| 4-hydroxyacetophenone monooxygenase | NCTC13350_01747 | Not Available | Positive | 1909778 - 1911580 | 66549.2 |
| cyn operon transcriptional activator | NCTC13350_01749 | Not Available | Negative | 1913784 - 1914107 | 11803.3 |
| putative hth-type transcriptional regulator ywna | NCTC13350_01750 | Not Available | Negative | 1914157 - 1914642 | 16732.3 |
| trans-aconitate methyltransferase | NCTC13350_01751 | Not Available | Positive | 1914752 - 1915438 | 24060.0 |
| putative dna helicase | NCTC13350_01752 | Not Available | Positive | 1915796 - 1918957 | 115826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
