Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase, short-chain specific | NCTC13350_01592 | Not Available | Positive | 1727503 - 1728675 | 42477.8 |
| probable diguanylate cyclase ycdt | NCTC13350_01593 | Not Available | Positive | 1728860 - 1730089 | 43687.8 |
| atp-dependent clp protease proteolytic subunit | NCTC13350_01594 | Not Available | Positive | 1730237 - 1730851 | 22496.9 |
| uncharacterised protein | NCTC13350_01595 | Not Available | Negative | 1730921 - 1731328 | 15491.7 |
| duf218 domain | NCTC13350_01596 | Not Available | Positive | 1731501 - 1732397 | 32652.4 |
| adenylate cyclase 1 | NCTC13350_01597 | Not Available | Positive | 1732494 - 1733738 | 44560.3 |
| protein of uncharacterised function, duf599 | NCTC13350_01598 | Not Available | Negative | 1733621 - 1734379 | 27700.0 |
| uncharacterised protein | NCTC13350_01599 | Not Available | Positive | 1734616 - 1734777 | 5662.03 |
| putative nadh-flavin reductase | NCTC13350_01600 | Not Available | Negative | 1734862 - 1735779 | 31618.8 |
| protein of uncharacterised function (duf1489) | NCTC13350_01601 | Not Available | Positive | 1735933 - 1736367 | 16449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
