Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stalked cell differentiation-controlling protein | NCTC13350_01319 | Not Available | Negative | 1443239 - 1444489 | 46275.5 |
| log family protein yvdd | NCTC13350_01320 | Not Available | Negative | 1444717 - 1445322 | 21974.7 |
| lysm domain/bon superfamily protein | NCTC13350_01321 | Not Available | Positive | 1445494 - 1446981 | 50004.7 |
| uncharacterised protein | NCTC13350_01322 | Not Available | Positive | 1447096 - 1447395 | 10795.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | NCTC13350_01323 | Not Available | Negative | 1447546 - 1448886 | 46398.2 |
| protocatechuate 3,4-dioxygenase alpha chain | NCTC13350_01324 | Not Available | Negative | 1449101 - 1449727 | 23383.5 |
| protocatechuate 3,4-dioxygenase beta chain | NCTC13350_01325 | Not Available | Negative | 1449731 - 1450483 | 28120.5 |
| 4-carboxymuconolactone decarboxylase | NCTC13350_01326 | Not Available | Negative | 1450480 - 1450926 | 15947.8 |
| 3-oxoadipate enol-lactonase 2 | NCTC13350_01327 | Not Available | Negative | 1450919 - 1451707 | 27732.3 |
| galactose-binding protein regulator | NCTC13350_01328 | Not Available | Positive | 1451837 - 1452757 | 33469.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
