Pannonibacter phragmitetus strain NCTC13350

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain NCTC13350 is a bacterial strain characterized by a single replicon, indicating a streamlined genetic structure. The genomic data for this strain is cataloged under the accession number UGSK00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. As a member of the Pannonibacter genus, Pannonibacter phragmitetus is likely associated with specific ecological niches, particularly in wetland environments. This genus is known for its ability to thrive in diverse habitats, suggesting that Pannonibacter phragmitetus may play a role in the microbiomes of such ecosystems. The presence of a single replicon could imply a level of genetic stability, which may be advantageous for survival and adaptation in fluctuating environments typical of wetlands. Understanding the traits of Pannonibacter phragmitetus, particularly its single replicon, allows researchers to explore its potential contributions to microbial diversity and ecosystem functioning. Its ecological role could be significant in nutrient cycling and interactions with other microbial species, potentially influencing the overall health and dynamics of its habitat. Further studies on this strain may reveal insights into its specific functions and interactions within its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain NCTC13350

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain NCTC13350 genome assembly,

Gene Summary

Adenine Count

898565 bp

Thymine Count

886307 bp

Guanine Count

1522235 bp

Cytosine Count

1530380 bp

Genome Length

4837487 bp

Protein-coding Genes

4201 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione transport system permease protein gsicNCTC13350_01249Not AvailableNegative1359146 - 136009634019.0
glutathione-binding protein gsib precursorNCTC13350_01250Not AvailableNegative1360158 - 136166054166.7
quercetin 2,3-dioxygenaseNCTC13350_01251Not AvailableNegative1361777 - 136270334015.5
topology modulation proteinNCTC13350_01252Not AvailablePositive1362826 - 136334720417.7
d-malate degradation protein rNCTC13350_01253Not AvailableNegative1363360 - 136424131794.2
methylmalonate-semialdehyde dehydrogenaseNCTC13350_01254Not AvailablePositive1364375 - 136587453445.5
atp-binding/permease protein cyddNCTC13350_01255Not AvailablePositive1366303 - 136811163241.7
probable abc transporter atp-binding protein hi_0664NCTC13350_01256Not AvailablePositive1368108 - 136977257917.2
cytochrome d ubiquinol oxidase subunit 1NCTC13350_01257Not AvailablePositive1370029 - 137161258873.1
cytochrome d ubiquinol oxidase subunit 2NCTC13350_01258Not AvailablePositive1371617 - 137277141391.9

Displaying genes 1241 – 1250 of 4278 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.