Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter membrane protein | NCTC13350_01055 | Not Available | Positive | 1141396 - 1142268 | 31489.4 |
| spermidine/putrescine transport system permease protein potb | NCTC13350_01056 | Not Available | Positive | 1142265 - 1143047 | 28609.0 |
| spermidine/putrescine import atp-binding protein pota | NCTC13350_01057 | Not Available | Positive | 1143047 - 1144108 | 37748.8 |
| alpha/beta hydrolase family | NCTC13350_01058 | Not Available | Negative | 1144146 - 1145051 | 33382.7 |
| putative crown gall tumor protein virc1 | NCTC13350_01059 | Not Available | Positive | 1145462 - 1146166 | 25500.8 |
| protein of uncharacterised function (duf2585) | NCTC13350_01060 | Not Available | Negative | 1146493 - 1147050 | 20397.2 |
| peptide chain release factor 3 | NCTC13350_01061 | Not Available | Positive | 1147314 - 1148903 | 59187.6 |
| h1 | NCTC13350_01062 | Not Available | Positive | 1149082 - 1150764 | 59602.1 |
| ribosomal rna small subunit methyltransferase c | NCTC13350_01063 | Not Available | Positive | 1150826 - 1151926 | 38972.9 |
| ribosomal small subunit pseudouridine synthase a | NCTC13350_01064 | Not Available | Positive | 1151923 - 1152627 | 26342.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
