Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pannonibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pannonibacter |
| Species | Pannonibacter phragmitetus |
| Strain | strain NCTC13350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
898565 bp
Thymine Count
886307 bp
Guanine Count
1522235 bp
Cytosine Count
1530380 bp
Genome Length
4837487 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinate/shikimate dehydrogenase | NCTC13350_01025 | Not Available | Positive | 1110785 - 1111651 | 30181.2 |
| 4-hydroxyphenylpyruvate dioxygenase | NCTC13350_01026 | Not Available | Positive | 1111656 - 1113569 | 68724.0 |
| plasmid stabilisation system protein | NCTC13350_01027 | Not Available | Negative | 1113573 - 1113938 | 13348.3 |
| antitoxin pard4 | NCTC13350_01028 | Not Available | Negative | 1113935 - 1114201 | 9750.46 |
| uncharacterised protein | NCTC13350_01029 | Not Available | Positive | 1115282 - 1115416 | 5137.15 |
| site-specific tyrosine recombinase xerd | NCTC13350_01030 | Not Available | Negative | 1115528 - 1117057 | 57009.2 |
| Trna-thr | Not Available | Not Available | Positive | 1117137 - 1117211 | Not Available |
| uncharacterised protein | NCTC13350_01032 | Not Available | Positive | 1117450 - 1117653 | 7002.12 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | NCTC13350_01033 | Not Available | Positive | 1117838 - 1119127 | 45747.6 |
| protein of uncharacterised function (duf2948) | NCTC13350_01034 | Not Available | Positive | 1119258 - 1119698 | 16052.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
