Pandoraea pulmonicola strain NCTC13159

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea pulmonicola strain NCTC13159 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is indicative of its genetic structure and replication mechanism. Additionally, Pandoraea pulmonicola is classified as non-spore-forming, meaning it does not produce spores as a means of survival in adverse environmental conditions. The strain is cataloged under the accession number UGSJ00000000.1, which is utilized for its genetic information and sequencing data. This identification is crucial for researchers studying the genetic makeup, metabolic pathways, and potential applications of this bacterium. From a biological and ecological perspective, the characteristics of Pandoraea pulmonicola suggest that it may play a role in specific ecological niches, particularly in environments where Gram-negative, non-spore-forming bacteria are prevalent. Such bacteria are often involved in nutrient cycling and may interact with other microorganisms in the ecosystem. Understanding the traits of Pandoraea pulmonicola can help elucidate its potential contributions to microbial communities, particularly in relation to its habitat and interactions with other species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea pulmonicola
Strainstrain NCTC13159

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea pulmonicola strain NCTC13159 genome assembly, contig:

Gene Summary

Adenine Count

1047811 bp

Thymine Count

1047162 bp

Guanine Count

1888090 bp

Cytosine Count

1884396 bp

Genome Length

5867459 bp

Protein-coding Genes

5033 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized protein with a c-terminal omp (outer membrane protein) domainNCTC13159_01028Not AvailableNegative1152746 - 1156099116980.0
uncharacterised proteinNCTC13159_01029Not AvailablePositive1156529 - 11566333751.52
transcriptional regulatory protein afsq1NCTC13159_01030Not AvailablePositive1157057 - 115765922149.5
alkaline phosphatase synthesis sensor protein phorNCTC13159_01031Not AvailablePositive1157688 - 115927158198.0
probable efflux pump outer membrane protein ttgc precursorNCTC13159_01032Not AvailableNegative1159349 - 116086053821.9
macrolide export atp-binding/permease protein macbNCTC13159_01033Not AvailableNegative1160872 - 116295674727.5
macrolide-specific efflux protein maca precursorNCTC13159_01034Not AvailableNegative1162978 - 116417142622.2
uncharacterised proteinNCTC13159_01035Not AvailablePositive1164447 - 11646326562.93
predicted membrane proteinNCTC13159_01036Not AvailablePositive1164662 - 116529722722.6
transposase is116/is110/is902 familyNCTC13159_01037Not AvailablePositive1165575 - 116678043453.9

Displaying genes 1021 – 1030 of 5119 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.