Nocardia africana strain NCTC13184

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia africana strain NCTC13184 is an aerobic actinomycete characterized by its requirement for oxygen to thrive. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperatures typically found in terrestrial environments. The presence of flagella suggests that N. africana has the ability to exhibit motility, which may enhance its adaptability and survival in various ecological niches. N. africana strain NCTC13184 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its metabolic efficiency. The strain is cataloged under the accession number UGRU00000000.1, which serves as a reference for genomic studies and further characterization. From a biological and ecological perspective, the traits of Nocardia africana strain NCTC13184 suggest that it plays a role in soil ecosystems, where aerobic conditions prevail. Its mesophilic nature aligns with the temperatures commonly found in surface soils, allowing it to participate in biogeochemical cycles, including the degradation of organic matter. The motility conferred by flagella may facilitate the organism's movement toward nutrient-rich environments, thereby enhancing its capacity to thrive in complex microbial communities. Overall, N. africana contributes to the dynamics of soil health and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia africana
Strainstrain NCTC13184

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia africana strain NCTC13184 genome assembly, contig:

Gene Summary

Adenine Count

1242717 bp

Thymine Count

1244260 bp

Guanine Count

2629278 bp

Cytosine Count

2634331 bp

Genome Length

7750586 bp

Protein-coding Genes

7266 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
domain of uncharacterised function (duf397)NCTC13184_07104Not AvailablePositive7459291 - 74594977347.66
putative transposaseNCTC13184_07105Not AvailablePositive7459834 - 746083537293.8
uncharacterised proteinNCTC13184_07106Not AvailablePositive7460926 - 746122510707.8
abc-type spermidine/putrescine transport systems, atpase componentsNCTC13184_07107Not AvailableNegative7461234 - 746172215977.0
chaperone protein hscaNCTC13184_07108Not AvailableNegative7461785 - 746314946874.2
udp-glucose 6-dehydrogenase ywqfNCTC13184_07109Not AvailableNegative7463328 - 746465047259.6
duf218 domainNCTC13184_07110Not AvailablePositive7464805 - 746531118702.4
uncharacterised proteinNCTC13184_07111Not AvailableNegative7465388 - 746644037501.8
uncharacterized membrane proteinNCTC13184_07112Not AvailablePositive7466579 - 746822259225.8
deoxycytidine triphosphate deaminaseNCTC13184_07113Not AvailableNegative7468278 - 746887721770.9

Displaying genes 7081 – 7090 of 7370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.