Nocardia africana strain NCTC13184

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia africana strain NCTC13184 is an aerobic actinomycete characterized by its requirement for oxygen to thrive. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperatures typically found in terrestrial environments. The presence of flagella suggests that N. africana has the ability to exhibit motility, which may enhance its adaptability and survival in various ecological niches. N. africana strain NCTC13184 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its metabolic efficiency. The strain is cataloged under the accession number UGRU00000000.1, which serves as a reference for genomic studies and further characterization. From a biological and ecological perspective, the traits of Nocardia africana strain NCTC13184 suggest that it plays a role in soil ecosystems, where aerobic conditions prevail. Its mesophilic nature aligns with the temperatures commonly found in surface soils, allowing it to participate in biogeochemical cycles, including the degradation of organic matter. The motility conferred by flagella may facilitate the organism's movement toward nutrient-rich environments, thereby enhancing its capacity to thrive in complex microbial communities. Overall, N. africana contributes to the dynamics of soil health and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia africana
Strainstrain NCTC13184

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia africana strain NCTC13184 genome assembly, contig:

Gene Summary

Adenine Count

1242717 bp

Thymine Count

1244260 bp

Guanine Count

2629278 bp

Cytosine Count

2634331 bp

Genome Length

7750586 bp

Protein-coding Genes

7266 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative dna ligase-like protein rv0938/mt0965NCTC13184_06923Not AvailableNegative7262281 - 726387957003.4
anaerobic benzoate catabolism transcriptional regulatorNCTC13184_06924Not AvailablePositive7263943 - 726535252653.7
carboxymuconolactone decarboxylase familyNCTC13184_06925Not AvailablePositive7265408 - 726594720177.2
tetracyclin repressor, c-terminal all-alpha domainNCTC13184_06926Not AvailableNegative7265981 - 726679929033.4
predicted enzyme related to lactoylglutathione lyaseNCTC13184_06927Not AvailablePositive7266966 - 726738214772.2
quinone oxidoreductase 2NCTC13184_06928Not AvailableNegative7267470 - 726832429864.1
uncharacterized hth-type transcriptional regulator yybrNCTC13184_06929Not AvailablePositive7268424 - 726884015494.5
dihydrolipoyl dehydrogenaseNCTC13184_06930Not AvailableNegative7268901 - 727030449838.6
membrane dipeptidase (peptidase family m19)NCTC13184_06931Not AvailableNegative7270383 - 727140836962.5
prolyl endopeptidaseNCTC13184_06932Not AvailablePositive7271549 - 727363377431.6

Displaying genes 6901 – 6910 of 7370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.