Nocardia africana strain NCTC13184

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia africana strain NCTC13184 is an aerobic actinomycete characterized by its requirement for oxygen to thrive. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperatures typically found in terrestrial environments. The presence of flagella suggests that N. africana has the ability to exhibit motility, which may enhance its adaptability and survival in various ecological niches. N. africana strain NCTC13184 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its metabolic efficiency. The strain is cataloged under the accession number UGRU00000000.1, which serves as a reference for genomic studies and further characterization. From a biological and ecological perspective, the traits of Nocardia africana strain NCTC13184 suggest that it plays a role in soil ecosystems, where aerobic conditions prevail. Its mesophilic nature aligns with the temperatures commonly found in surface soils, allowing it to participate in biogeochemical cycles, including the degradation of organic matter. The motility conferred by flagella may facilitate the organism's movement toward nutrient-rich environments, thereby enhancing its capacity to thrive in complex microbial communities. Overall, N. africana contributes to the dynamics of soil health and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia africana
Strainstrain NCTC13184

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia africana strain NCTC13184 genome assembly, contig:

Gene Summary

Adenine Count

1242717 bp

Thymine Count

1244260 bp

Guanine Count

2629278 bp

Cytosine Count

2634331 bp

Genome Length

7750586 bp

Protein-coding Genes

7266 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
long-chain-fatty-acid--coa ligase fadd19NCTC13184_04842Not AvailableNegative5049997 - 505166759058.3
benzoylformate decarboxylaseNCTC13184_04843Not AvailableNegative5051711 - 505340560145.2
probable f420-dependent oxidoreductase, msmeg_4141 familyNCTC13184_04844Not AvailableNegative5053438 - 505437033436.2
uncharacterised proteinNCTC13184_04845Not AvailableNegative5054367 - 505465110829.8
predicted metal-dependent hydrolase of the tim-barrel foldNCTC13184_04846Not AvailableNegative5054654 - 505555932823.0
predicted metal-dependent hydrolase of the tim-barrel foldNCTC13184_04847Not AvailableNegative5055642 - 505683844265.2
uncharacterized hth-type transcriptional regulator yxafNCTC13184_04848Not AvailableNegative5057337 - 505792120393.0
nipsnapNCTC13184_04849Not AvailablePositive5058189 - 505852712640.6
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenaseNCTC13184_04850Not AvailablePositive5058621 - 505938826957.8
flavin-dependent monooxygenase, reductase subunit hsabNCTC13184_04851Not AvailableNegative5059640 - 506013717609.1

Displaying genes 4901 – 4910 of 7370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.