Nocardia africana strain NCTC13184

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia africana strain NCTC13184 is an aerobic actinomycete characterized by its requirement for oxygen to thrive. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperatures typically found in terrestrial environments. The presence of flagella suggests that N. africana has the ability to exhibit motility, which may enhance its adaptability and survival in various ecological niches. N. africana strain NCTC13184 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its metabolic efficiency. The strain is cataloged under the accession number UGRU00000000.1, which serves as a reference for genomic studies and further characterization. From a biological and ecological perspective, the traits of Nocardia africana strain NCTC13184 suggest that it plays a role in soil ecosystems, where aerobic conditions prevail. Its mesophilic nature aligns with the temperatures commonly found in surface soils, allowing it to participate in biogeochemical cycles, including the degradation of organic matter. The motility conferred by flagella may facilitate the organism's movement toward nutrient-rich environments, thereby enhancing its capacity to thrive in complex microbial communities. Overall, N. africana contributes to the dynamics of soil health and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia africana
Strainstrain NCTC13184

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia africana strain NCTC13184 genome assembly, contig:

Gene Summary

Adenine Count

1242717 bp

Thymine Count

1244260 bp

Guanine Count

2629278 bp

Cytosine Count

2634331 bp

Genome Length

7750586 bp

Protein-coding Genes

7266 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavin-dependent monooxygenase, oxygenase subunit hsaaNCTC13184_02957Not AvailablePositive3078398 - 307958242756.8
iron-dependent extradiol dioxygenaseNCTC13184_02958Not AvailablePositive3079627 - 308053233474.7
3-oxosteroid 1-dehydrogenaseNCTC13184_02959Not AvailablePositive3080529 - 308227460895.9
3-ketosteroid-9-alpha-hydroxylase oxygenase subunitNCTC13184_02960Not AvailablePositive3082258 - 308339442902.3
uncharacterised proteinNCTC13184_02961Not AvailablePositive3083391 - 30836579614.35
transcriptional regulator kdgrNCTC13184_02962Not AvailableNegative3084053 - 308483528396.6
mycofactocin system transcriptional regulatorNCTC13184_02963Not AvailablePositive3085030 - 308566524101.1
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolaseNCTC13184_02964Not AvailableNegative3085706 - 308657231551.9
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolaseNCTC13184_02965Not AvailablePositive3086741 - 308761031450.6
biphenyl-2,3-diol 1,2-dioxygenaseNCTC13184_02966Not AvailablePositive3087607 - 308863538360.7

Displaying genes 3021 – 3030 of 7370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.