Nocardia africana strain NCTC13184

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia africana strain NCTC13184 is an aerobic actinomycete characterized by its requirement for oxygen to thrive. This strain is mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperatures typically found in terrestrial environments. The presence of flagella suggests that N. africana has the ability to exhibit motility, which may enhance its adaptability and survival in various ecological niches. N. africana strain NCTC13184 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its metabolic efficiency. The strain is cataloged under the accession number UGRU00000000.1, which serves as a reference for genomic studies and further characterization. From a biological and ecological perspective, the traits of Nocardia africana strain NCTC13184 suggest that it plays a role in soil ecosystems, where aerobic conditions prevail. Its mesophilic nature aligns with the temperatures commonly found in surface soils, allowing it to participate in biogeochemical cycles, including the degradation of organic matter. The motility conferred by flagella may facilitate the organism's movement toward nutrient-rich environments, thereby enhancing its capacity to thrive in complex microbial communities. Overall, N. africana contributes to the dynamics of soil health and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia africana
Strainstrain NCTC13184

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia africana strain NCTC13184 genome assembly, contig:

Gene Summary

Adenine Count

1242717 bp

Thymine Count

1244260 bp

Guanine Count

2629278 bp

Cytosine Count

2634331 bp

Genome Length

7750586 bp

Protein-coding Genes

7266 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-3NCTC13184_02615Not AvailablePositive2732046 - 273272624466.2
rrp-l35NCTC13184_02616Not AvailablePositive2732793 - 27329877361.16
50s ribosomal protein l20NCTC13184_02617Not AvailablePositive2733062 - 273344214126.1
putative trmh family trna/rrna methyltransferaseNCTC13184_02618Not AvailablePositive2733454 - 273436231726.4
multidrug-efflux transporter 3NCTC13184_02619Not AvailableNegative2734445 - 273686583351.5
rut operon repressorNCTC13184_02620Not AvailableNegative2737053 - 273762520554.5
spectinomycin tetracycline efflux pumpNCTC13184_02621Not AvailablePositive2737771 - 273924950408.1
phenylalanine--trna ligase alpha subunitNCTC13184_02622Not AvailablePositive2739564 - 274063738614.8
phenylalanine--trna ligase beta subunitNCTC13184_02623Not AvailablePositive2740692 - 274319388617.7
antitoxin maze9NCTC13184_02624Not AvailablePositive2743230 - 27434427676.79

Displaying genes 2681 – 2690 of 7370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.