Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein soxs | NCTC8535_00646 | Not Available | Positive | 660666 - 661037 | 14346.3 |
| uncharacterised protein | NCTC8535_00647 | Not Available | Positive | 661521 - 662114 | 21795.8 |
| probable diguanylate cyclase yfin | NCTC8535_00648 | Not Available | Positive | 662115 - 663341 | 45573.7 |
| outer membrane protein arfa | NCTC8535_00649 | Not Available | Positive | 663379 - 663864 | 17864.5 |
| proline porter ii | NCTC8535_00650 | Not Available | Positive | 664281 - 665783 | 54954.0 |
| uncharacterised protein | NCTC8535_00651 | Not Available | Positive | 665982 - 666125 | 4979.1 |
| uncharacterised protein | NCTC8535_00652 | Not Available | Negative | 666188 - 666466 | 10149.7 |
| inner membrane protein yfdc | NCTC8535_00653 | Not Available | Positive | 666645 - 667547 | 33391.9 |
| inner membrane protein | NCTC8535_00654 | Not Available | Positive | 667637 - 668311 | 24054.5 |
| inner membrane protein ypha | NCTC8535_00655 | Not Available | Positive | 668451 - 668867 | 15391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


