Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-2-deoxygluconokinase | NCTC8535_00586 | Not Available | Positive | 605800 - 606747 | 34150.1 |
| uncharacterized conserved small protein | NCTC8535_00587 | Not Available | Negative | 606757 - 607122 | 13570.1 |
| phage-related protein | NCTC8535_00588 | Not Available | Negative | 607115 - 607516 | 15605.0 |
| uncharacterized hth-type transcriptional regulator yegw | NCTC8535_00589 | Not Available | Negative | 607810 - 608571 | 28492.2 |
| adenylosuccinate lyase | NCTC8535_00590 | Not Available | Negative | 608757 - 610127 | 51385.4 |
| high frequency lysogenization protein hfld | NCTC8535_00591 | Not Available | Negative | 610283 - 610909 | 22841.9 |
| probable diguanylate cyclase ycdt | NCTC8535_00592 | Not Available | Negative | 611079 - 612137 | 39765.9 |
| pp_00554 | NCTC8535_00593 | Not Available | Negative | 612296 - 613399 | Not Available |
| putative anti-sigmae protein | NCTC8535_00594 | Not Available | Negative | 613550 - 614233 | 24852.3 |
| sigma-k factor | NCTC8535_00595 | Not Available | Negative | 614230 - 614793 | 21099.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


