Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| basal body l-ring protein | NCTC8535_00455 | Not Available | Positive | 473880 - 474683 | 28246.3 |
| basal body p-ring protein | NCTC8535_00456 | Not Available | Positive | 474698 - 475870 | 40697.2 |
| peptidoglycan hydrolase flgj | NCTC8535_00457 | Not Available | Positive | 475870 - 476808 | 33677.9 |
| flagellar hook-associated protein 1 | NCTC8535_00458 | Not Available | Positive | 477130 - 478815 | 59227.5 |
| hook-filament junction protein | NCTC8535_00459 | Not Available | Positive | 478831 - 479811 | 35170.9 |
| flagellar biosynthetic protein flir | NCTC8535_00460 | Not Available | Negative | 479899 - 480684 | 28261.9 |
| flagellar biosynthetic protein fliq | NCTC8535_00461 | Not Available | Negative | 480693 - 480962 | 9483.24 |
| flagellar biosynthetic protein flip precursor | NCTC8535_00462 | Not Available | Negative | 480988 - 481734 | 27229.4 |
| flagellar protein flio | NCTC8535_00463 | Not Available | Negative | 481734 - 482135 | 14201.3 |
| flagellar motor switch protein flin | NCTC8535_00464 | Not Available | Negative | 482135 - 482560 | 15279.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


