Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor-like histidine kinase rcsd | NCTC8535_00277 | Not Available | Negative | 286058 - 288763 | 102644.0 |
| inner membrane transport permease ybhr | NCTC8535_00278 | Not Available | Negative | 288940 - 290064 | 42029.7 |
| inner membrane transport permease ybhs | NCTC8535_00279 | Not Available | Negative | 290074 - 291219 | 41979.3 |
| uncharacterized abc transporter atp-binding protein ybhf | NCTC8535_00280 | Not Available | Negative | 291216 - 292955 | 63854.6 |
| macrolide-specific efflux protein maca precursor | NCTC8535_00281 | Not Available | Negative | 292964 - 293962 | 35954.5 |
| hth-type transcriptional repressor acnr | NCTC8535_00282 | Not Available | Negative | 293955 - 294686 | 26756.2 |
| protein of uncharacterised function (duf2874) | NCTC8535_00283 | Not Available | Positive | 295183 - 300381 | 175141.0 |
| uncharacterised protein | NCTC8535_00284 | Not Available | Positive | 300439 - 307989 | 253617.0 |
| outer membrane efflux protein bepc precursor | NCTC8535_00285 | Not Available | Positive | 308349 - 309713 | 49879.2 |
| alpha-hemolysin translocation atp-binding protein hlyb | NCTC8535_00286 | Not Available | Positive | 309744 - 311888 | 79228.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


