Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase cas3, subtype i-f/ypest | NCTC8535_00249 | Not Available | Positive | 258285 - 261596 | 124650.0 |
| crispr type i-f/ypest-associated protein csy1 | NCTC8535_00250 | Not Available | Positive | 261636 - 262907 | 49283.7 |
| crispr type i-f/ypest-associated protein csy2 | NCTC8535_00251 | Not Available | Positive | 262907 - 263857 | 35550.5 |
| crispr type i-f/ypest-associated protein csy3 | NCTC8535_00252 | Not Available | Positive | 263882 - 264883 | 36692.8 |
| crispr-associated protein cas6/csy4, subtype i-f/ypest | NCTC8535_00253 | Not Available | Positive | 264893 - 265447 | 20680.0 |
| protein of uncharacterised function (duf3828) | NCTC8535_00262 | Not Available | Negative | 266571 - 267005 | 16201.2 |
| trp repressor-binding protein | NCTC8535_00263 | Not Available | Positive | 267280 - 267858 | 20459.0 |
| inner membrane protein ybhl | NCTC8535_00264 | Not Available | Positive | 268095 - 268805 | 26008.4 |
| glutathione import atp-binding protein gsia | NCTC8535_00265 | Not Available | Negative | 268892 - 269608 | 26888.6 |
| glutathione import atp-binding protein gsia | NCTC8535_00266 | Not Available | Negative | 269595 - 270446 | 31410.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


