Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC8535_04524 | Not Available | Positive | 4761821 - 4762045 | 8347.08 |
| type iv secretion system lytic transglycosylase virb1 | NCTC8535_04525 | Not Available | Positive | 4762098 - 4762772 | 24956.8 |
| trbc/virb2 family | NCTC8535_04526 | Not Available | Positive | 4762769 - 4763071 | 10610.3 |
| pertussis toxin liberation protein c | NCTC8535_04527 | Not Available | Positive | 4763086 - 4765836 | 104463.0 |
| p-type dna transfer protein virb5 | NCTC8535_04528 | Not Available | Positive | 4765871 - 4766608 | 26772.8 |
| uncharacterised protein | NCTC8535_04529 | Not Available | Positive | 4766619 - 4766897 | 10661.8 |
| trbl/virb6 plasmid conjugal transfer protein | NCTC8535_04530 | Not Available | Positive | 4766908 - 4767927 | 36006.9 |
| uncharacterised protein | NCTC8535_04531 | Not Available | Positive | 4768012 - 4768152 | 5005.37 |
| type iv secretion system protein virb8 | NCTC8535_04532 | Not Available | Positive | 4768145 - 4768828 | 26373.5 |
| pertussis toxin liberation protein f | NCTC8535_04533 | Not Available | Positive | 4768828 - 4769727 | 33127.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


