Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposon tn552 dna-invertase bin3 | NCTC8535_04513 | Not Available | Positive | 4754541 - 4755530 | 37482.3 |
| uncharacterized conserved small protein | NCTC8535_04514 | Not Available | Negative | 4755818 - 4756372 | 20632.3 |
| uncharacterised protein | NCTC8535_04515 | Not Available | Negative | 4756375 - 4756956 | 21336.6 |
| sporulation initiation inhibitor protein soj | NCTC8535_04516 | Not Available | Positive | 4757160 - 4757780 | 22106.5 |
| parg | NCTC8535_04517 | Not Available | Positive | 4757820 - 4758047 | 8532.09 |
| toxin pare1 | NCTC8535_04518 | Not Available | Negative | 4758178 - 4758462 | 11022.2 |
| antitoxin pard1 | NCTC8535_04519 | Not Available | Negative | 4758455 - 4758697 | 8906.57 |
| replication-associated protein | NCTC8535_04520 | Not Available | Negative | 4759270 - 4760199 | 35889.4 |
| helix-turn-helix domain | NCTC8535_04522 | Not Available | Negative | 4760700 - 4761092 | 15333.4 |
| transcriptional activator rfah | NCTC8535_04523 | Not Available | Positive | 4761301 - 4761756 | 17134.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


